h2o在Ubuntu上构建失败16.04

我正在尝试构建ubuntu 16.04的h2o源代码。
这里是输出：h2o在Ubuntu上构建失败16.04

:h2o-r:classes UP-TO-DATE 
:h2o-r:jar UP-TO-DATE 
:h2o-r:assemble UP-TO-DATE 
:h2o-r:getRVersion 
:h2o-r:gitbranch 
:h2o-r:pdflatex 
:h2o-r:setProperties 
    Git Branch: master 
    R Version: 3.3.3 
    PDF LATEX: /usr/bin/pdflatex 
:h2o-r:cpH2OAppJar 
:h2o-r:setDevPackageFiles 
:h2o-r:setPackageFiles 
:h2o-r:buildPackageDocumentation FAILED 

FAILURE: Build failed with an exception. 

* What went wrong: 
Execution failed for task ':h2o-r:buildPackageDocumentation'. 
> Process 'command 'R'' finished with non-zero exit value 1 

* Try: 
Run with --stacktrace option to get the stack trace. Run with --info or --debug option to get more log output. 

BUILD FAILED 

Total time: 33.713 secs 

Task timings: 
    14.641 secs :h2o-assemblies:main:shadowJar 
    8.099 secs :h2o-bindings:runGenerateRESTAPIBindingsSrc 
    4.404 secs :h2o-py:buildDist 
    1.360 secs :h2o-web:installNpmPackages 
    0.780 secs :h2o-py:verifyDependencies 
    0.771 secs :h2o-bindings:compileJava 
    0.596 secs :h2o-assemblies:main:copyJar 
    1.585 secs All others

我已经安装了所有先决条件。它能够构建所有软件包&在文档中发生故障。我怎样才能解决这个问题？

来源

2017-04-08 Kapil Gupta

我已经删除了'java'标签作为这个问题并不涉及到Java。 –

在回购更新你的问题，还有在码头工人实现一个完整的H2O2开发环境基于16.04。在同一个文件夹中有一个Ubuntu 16.04安装脚本。

http://github.com/h2oai/h2o-3/docker/setup-h2o-dev.sh

来源

2017-04-08 14:43:15 Jeff

这两个答案都非常有用和正确，但是这更容易使用。 –

我有同样的问题。要解决它，我改名为我的~/.Rprofile文件（即使它是默认的）

我有我的机器上的两个R版本，R 3.2.2和R 3.3.3，这混淆了构建脚本。

因此，为了使构建脚本更简单，我使用修改的PATH变量运行它，成功！

（什么是令人不解的是它仍然使用[R 3.2.2虽然在/ usr/bin中为R 3.3.3！但是，安装续）

export PATH=/home/knut/.virtualenvs/h2oai/bin:/home/knut/.nvm/versions/node/v6.9.4/bin:/usr/sbin:/usr/bin:/sbin:/bin && ./gradlew build -x test

我已经排除（-x测试）的测试，因为他们虽然我的机器上旋转了多节点集群失败（java的运行内存不足）

结果：

:buildSrc:compileJava UP-TO-DATE 
    ... many many UP-to-DATEs .... 
    :h2o-r:compileJava UP-TO-DATE 
    :h2o-r:compileGroovy UP-TO-DATE 
    :h2o-r:processResources UP-TO-DATE 
    :h2o-r:classes UP-TO-DATE 
    :h2o-r:jar UP-TO-DATE 
    :h2o-r:assemble UP-TO-DATE 
    :h2o-r:getRVersion 
    :h2o-r:gitbranch 
    :h2o-r:pdflatex 
    :h2o-r:setProperties 
     Git Branch: master 
     R Version: 3.2.2 
     PDF LATEX: /usr/bin/pdflatex 
    :h2o-r:cpH2OAppJar 
    :h2o-r:setDevPackageFiles 
    :h2o-r:setPackageFiles 
    :h2o-r:buildPackageDocumentation  ####### here it exited previously, now continues 
    :h2o-r:buildPackageDocumentation took 3.828 secs 
    :h2o-r:genPDF 
    :h2o-r:genPDF took 4.432 secs 
    :h2o-r:cpPDF 
    :h2o-r:buildPKG 

    :h2o-r:buildPKG took 3.454 secs 
    :h2o-r:cpToR 
    :h2o-r:publishPKG 
    :h2o-r:untar 
    :h2o-r:cleaner 
    :h2o-r:build_rh2o 
    :h2o-r:check 
    :h2o-r:build 
    :h2o-scala_2.10:compileJava UP-TO-DATE 
    :h2o-scala_2.10:compileScala UP-TO-DATE 
    :h2o-scala_2.10:processResources UP-TO-DATE 
    :h2o-scala_2.10:classes UP-TO-DATE 
    :h2o-scala_2.10:jar UP-TO-DATE 
    :h2o-scala_2.10:assemble UP-TO-DATE 
    :h2o-scala_2.10:check 
    :h2o-scala_2.10:build 
    :h2o-scala_2.11:compileJava UP-TO-DATE 
    :h2o-scala_2.11:compileScala UP-TO-DATE 
    :h2o-scala_2.11:processResources UP-TO-DATE 
    :h2o-scala_2.11:classes UP-TO-DATE 
    :h2o-scala_2.11:jar UP-TO-DATE 
    :h2o-scala_2.11:assemble UP-TO-DATE 
    :h2o-scala_2.11:check 
    :h2o-scala_2.11:build 
    :h2o-test-accuracy:compileJava UP-TO-DATE 
    :h2o-test-accuracy:processResources UP-TO-DATE 
    :h2o-test-accuracy:classes UP-TO-DATE 
    :h2o-test-accuracy:jar UP-TO-DATE 
    :h2o-test-accuracy:assemble UP-TO-DATE 
    :h2o-test-accuracy:check 
    :h2o-test-accuracy:build 
    :h2o-test-integ:compileJava UP-TO-DATE 
    :h2o-test-integ:processResources UP-TO-DATE 
    :h2o-test-integ:classes UP-TO-DATE 
    :h2o-test-integ:jar UP-TO-DATE 
    :h2o-test-integ:assemble UP-TO-DATE 
    :h2o-test-integ:check 
    :h2o-test-integ:build 
    :h2o-web:assemble UP-TO-DATE 
    :h2o-web:check 
    :h2o-web:compileAndInstallDocFiles 
    :h2o-web:build 
    :h2o-assemblies:main:assemble 
    :h2o-assemblies:main:check 
    :h2o-assemblies:main:build 
    :h2o-hadoop:h2o-mapreduce-generic:compileJava UP-TO-DATE 
    :h2o-hadoop:h2o-mapreduce-generic:processResources UP-TO-DATE 
    :h2o-hadoop:h2o-mapreduce-generic:classes UP-TO-DATE 
    :h2o-hadoop:h2o-mapreduce-generic:jar UP-TO-DATE 
    :h2o-hadoop:h2o-mapreduce-generic:assemble UP-TO-DATE 
    :h2o-hadoop:h2o-mapreduce-generic:check 
    :h2o-hadoop:h2o-mapreduce-generic:build 
    :h2o-hadoop:h2o-yarn-generic:compileJava UP-TO-DATE 
    :h2o-hadoop:h2o-yarn-generic:processResources UP-TO-DATE 
    :h2o-hadoop:h2o-yarn-generic:classes UP-TO-DATE 
    :h2o-hadoop:h2o-yarn-generic:jar UP-TO-DATE 
    :h2o-hadoop:h2o-yarn-generic:assemble UP-TO-DATE 
    :h2o-hadoop:h2o-yarn-generic:check 
    :h2o-hadoop:h2o-yarn-generic:build 

    BUILD SUCCESSFUL 

    Total time: 31.37 secs 

    Task timings: 
     9.241 secs :h2o-assemblies:main:shadowJar 
     4.432 secs :h2o-r:genPDF 
     3.828 secs :h2o-r:buildPackageDocumentation 
     3.598 secs :h2o-bindings:runGenerateRESTAPIBindingsSrc 
     3.454 secs :h2o-r:buildPKG 
     2.083 secs :h2o-py:buildDist 
     0.922 secs :h2o-web:installNpmPackages 
     3.073 secs All others

然后，我R CMD INSTALL h2o-r/R/src/contrib/h2o_3.11.0.99999.tar.gz装式的R 3.3

如果仍然没有成功，运行

./gradlew build -x test --info

，并与相关的输出

来源

2017-04-08 08:18:42 knb

我没有自定义我的R安装。它只是一个直接的“apt”安装，添加了一些需要的包。我如何确认它是否为pdflatex问题？ –

恐怕我不知道。也许安装rstudio？它带来了大量的软件，以便将Rmarkdown呈现为PDF格式。在Rstudio中，生成一个简单的Rmarkdown文件，并将其作为PDF“编织”。如果这可行，你可能有一个工作的PDFlatex基础架构。 – knb

我能够成功编织pdf。虽然需要几个R包，但他们并没有帮助将h2o问题解决:(至少pdflatex不是问题。 –

您需要同步[R packags：

git clone https://github.com/h2oai/h2o-3.git 
cd h2o-3 
./gradlew syncSmalldata 
./gradlew syncRPackages 
./gradlew build

参考： https://github.com/h2oai/h2o-3

来源

2017-06-27 01:56:15 CodeFarmer

h2o在Ubuntu上构建失败16.04

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