我有一些线路有像壳GET字符串
1000 AS34_59329 RICwdsRSYHSD11-2-IPAAPEK-93 /ifshk5/BC_IP/PROJECT/T1
1073/T11073_RICekkR/Fq/AS34_59329/111220_I631_FCC0E5EACXX_L4_RICwdsRSYHSD11-2-IP
AAPEK-93_1.fq.gz /ifshk5/BC_IP/PROJECT/T11073/T11073_RICekkR/Fq/AS34_5932
9/111220_I631_FCC0E5EACXX_L4_RICwdsRSYHSD11-2-IPAAPEK-93_2.fq.gz /ifshk5/
BC_IP/PROJECT/T11073/T11073_RICekkR/Fq/AS34_59329/clean_111220_I631_FCC0E5EACXX_
L4_RICwdsRSYHSD11-2-IPAAPEK-93_1.fq.gz.total.info 11.824 0.981393
43.8283 95.7401 OK
相同的结构,我想获得加粗部分,以检查是否在/home/jesse/
有这个文件夹,如果不能创造的mkdir /home/jesse/AS34_59329
我用这个代码
! /bin/bash
myPath="/home/jesse/"
while read myline
do
dirname= echo "$myline" | awk -F ' ' '{print $2}'
echo $dirname
myPath= $myPath$dirname
echo $myPath
mkdir -p "$myPath"
done < T11073_all_3254.fq.list
但不能的mkdir,并显示路径名,它显示
-bash: /home/jesse/: is a directory
/home/jesse/
AS39_59324
我更改了代码,结果仍然相同 – AntiGMO
您是否更改了代码以合并此代码,或者是否复制粘贴了此建议? –
我发现原因是在awk中,它不能得到AS34_59329 – AntiGMO