apache-spark
  • machine-learning
  • pyspark
  • random-forest
  • 2016-06-23 206 views 0 likes 
    0

    这是我第一次在Spark中使用Mlib。我想运行一个随机森林Spark随机森林错误

    model = RandomForest.trainClassifier(trainingData, numClasses=2, categoricalFeaturesInfo={}, 
               numTrees=3, featureSubsetStrategy="auto", 
               impurity='gini', maxDepth=4, maxBins=40) 
    

    ,但我得到的错误

    Py4JJavaError        Traceback (most recent call last) 
    <ipython-input-49-5a8de04ff14b> in <module>() 
        4 model = RandomForest.trainClassifier(trainingData, numClasses=2,   categoricalFeaturesInfo={}, 
        5          numTrees=2, featureSubsetStrategy="auto", 
    ----> 6          impurity='gini', maxDepth=4, maxBins=40) 
    
    /opt/spark/current/python/pyspark/mllib/tree.py in trainClassifier(cls,data, numClasses, categoricalFeaturesInfo, numTrees, featureSubsetStrategy, impurity, maxDepth, maxBins, seed) 
    377   return cls._train(data, "classification", numClasses, 
    378       categoricalFeaturesInfo, numTrees, featureSubsetStrategy, impurity, 
    --> 379       maxDepth, maxBins, seed) 
    380 
    381  @classmethod 
    
    /opt/spark/current/python/pyspark/mllib/tree.py in _train(cls, data, algo, numClasses, categoricalFeaturesInfo, numTrees, featureSubsetStrategy, impurity, maxDepth, maxBins, seed) 
    294   model = callMLlibFunc("trainRandomForestModel", data, algo, numClasses, 
    295        categoricalFeaturesInfo, numTrees, featureSubsetStrategy, impurity, 
    --> 296        maxDepth, maxBins, seed) 
    297   return RandomForestModel(model) 
    298 
    
    /opt/spark/current/python/pyspark/mllib/common.py in callMLlibFunc(name, *args) 
    128  sc = SparkContext.getOrCreate() 
    129  api = getattr(sc._jvm.PythonMLLibAPI(), name) 
    --> 130  return callJavaFunc(sc, api, *args) 
    131 
    132 
    
    /opt/spark/current/python/pyspark/mllib/common.py in callJavaFunc(sc, func, *args) 
    121  """ Call Java Function """ 
    122  args = [_py2java(sc, a) for a in args] 
    --> 123  return _java2py(sc, func(*args)) 
    124 
    125 
    
    /opt/spark/current/python/lib/py4j-0.9-src.zip/py4j/java_gateway.py in __call__(self, *args) 
    811   answer = self.gateway_client.send_command(command) 
    812   return_value = get_return_value(
    --> 813    answer, self.gateway_client, self.target_id, self.name) 
    814 
    815   for temp_arg in temp_args: 
    
    /opt/spark/current/python/pyspark/sql/utils.py in deco(*a, **kw) 
    43  def deco(*a, **kw): 
    44   try: 
    ---> 45    return f(*a, **kw) 
    46   except py4j.protocol.Py4JJavaError as e: 
    47    s = e.java_exception.toString() 
    
    /opt/spark/current/python/lib/py4j-0.9-src.zip/py4j/protocol.py in get_return_value(answer, gateway_client, target_id, name) 
    306     raise Py4JJavaError(
    307      "An error occurred while calling {0}{1}{2}.\n". 
    --> 308      format(target_id, ".", name), value) 
    309    else: 
    310     raise Py4JError(
    
    Py4JJavaError: An error occurred while calling o1123.trainRandomForestModel. 
    : org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 94.0 failed 4 times, most recent failure: Lost task 0.3 in stage 94.0 (TID 680, mapr5-217.jiwiredev.com): java.lang.RuntimeException: No bin was found for continuous feature. This error can occur when given invalid data values (such as NaN). Feature index: 20. Feature value: 1670.0 
    at org.apache.spark.mllib.tree.impl.TreePoint$.findBin(TreePoint.scala:131) 
    at org.apache.spark.mllib.tree.impl.TreePoint$.org$apache$spark$mllib$tree$impl$TreePoint$$labeledPointToTreePoint(TreePoint.scala:84) 
    at org.apache.spark.mllib.tree.impl.TreePoint$$anonfun$convertToTreeRDD$2.apply(TreePoint.scala:66) 
    at org.apache.spark.mllib.tree.impl.TreePoint$$anonfun$convertToTreeRDD$2.apply(TreePoint.scala:65) 
    at scala.collection.Iterator$$anon$11.next(Iterator.scala:328) 
    at scala.collection.Iterator$$anon$11.next(Iterator.scala:328) 
    at org.apache.spark.storage.MemoryStore.unrollSafely(MemoryStore.scala:283) 
    at org.apache.spark.CacheManager.putInBlockManager(CacheManager.scala:171) 
    at org.apache.spark.CacheManager.getOrCompute(CacheManager.scala:78) 
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:268) 
    at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38) 
    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:306) 
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:270) 
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:73) 
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:41) 
    at org.apache.spark.scheduler.Task.run(Task.scala:89) 
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214) 
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) 
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) 
    at java.lang.Thread.run(Thread.java:745) 
    
    Driver stacktrace: 
    at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1431) 
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1419) 
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1418) 
    at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59) 
    at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47) 
    at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1418) 
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799) 
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799) 
    at scala.Option.foreach(Option.scala:236) 
    at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:799) 
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1640) 
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1599) 
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1588) 
    at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48) 
    at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:620) 
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1832) 
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1845) 
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1858) 
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1929) 
    at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:927) 
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150) 
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111) 
    at org.apache.spark.rdd.RDD.withScope(RDD.scala:316) 
    at org.apache.spark.rdd.RDD.collect(RDD.scala:926) 
    at org.apache.spark.rdd.PairRDDFunctions$$anonfun$collectAsMap$1.apply(PairRDDFunctions.scala:741) 
    at org.apache.spark.rdd.PairRDDFunctions$$anonfun$collectAsMap$1.apply(PairRDDFunctions.scala:740) 
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150) 
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111) 
    at org.apache.spark.rdd.RDD.withScope(RDD.scala:316) 
    at org.apache.spark.rdd.PairRDDFunctions.collectAsMap(PairRDDFunctions.scala:740) 
    at org.apache.spark.mllib.tree.DecisionTree$.findBestSplits(DecisionTree.scala:651) 
    at org.apache.spark.mllib.tree.RandomForest.run(RandomForest.scala:233) 
    at org.apache.spark.mllib.tree.RandomForest$.trainClassifier(RandomForest.scala:289) 
    at org.apache.spark.mllib.api.python.PythonMLLibAPI.trainRandomForestModel(PythonMLLibAPI.scala:751) 
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) 
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) 
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) 
    at java.lang.reflect.Method.invoke(Method.java:497) 
    at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:231) 
    at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:381) 
    at py4j.Gateway.invoke(Gateway.java:259) 
    at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:133) 
    at py4j.commands.CallCommand.execute(CallCommand.java:79) 
    at py4j.GatewayConnection.run(GatewayConnection.java:209) 
    at java.lang.Thread.run(Thread.java:745) 
    Caused by: java.lang.RuntimeException: No bin was found for continuous feature. This error can occur when given invalid data values (such as NaN). Feature index: 20. Feature value: 1670.0 
    at org.apache.spark.mllib.tree.impl.TreePoint$.findBin(TreePoint.scala:131) 
    at org.apache.spark.mllib.tree.impl.TreePoint$.org$apache$spark$mllib$tree$impl$TreePoint$$labeledPointToTreePoint(TreePoint.scala:84) 
    at org.apache.spark.mllib.tree.impl.TreePoint$$anonfun$convertToTreeRDD$2.apply(TreePoint.scala:66) 
    at org.apache.spark.mllib.tree.impl.TreePoint$$anonfun$convertToTreeRDD$2.apply(TreePoint.scala:65) 
    at scala.collection.Iterator$$anon$11.next(Iterator.scala:328) 
    at scala.collection.Iterator$$anon$11.next(Iterator.scala:328) 
    at org.apache.spark.storage.MemoryStore.unrollSafely(MemoryStore.scala:283) 
    at org.apache.spark.CacheManager.putInBlockManager(CacheManager.scala:171) 
    at org.apache.spark.CacheManager.getOrCompute(CacheManager.scala:78) 
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:268) 
    at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38) 
    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:306) 
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:270) 
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:73) 
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:41) 
    at org.apache.spark.scheduler.Task.run(Task.scala:89) 
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214) 
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) 
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) 
    ... 1 more 
    

    我喂养它一个LabeledPoint。请让我知道我是否应该发布任何其他代码。

    的任何解释,将不胜感激

    回答

    0

    了java.lang.RuntimeException:无仓被发现的连续功能。

    您需要为输入数据提供有效的桶。 1671不在任何为特征序号20定义的桶中。

    /** 
        * Find discretized value for one (labeledPoint, feature). 
        * 
        * NOTE: We cannot use Bucketizer since it handles split thresholds differently than the old 
        *  (mllib) tree API. We want to maintain the same behavior as the old tree API. 
        * 
        * @param featureArity 0 for continuous features; number of categories for categorical features. 
        */ 
        private def findBin(
         featureIndex: Int, 
         labeledPoint: LabeledPoint, 
         featureArity: Int, 
         thresholds: Array[Double]): Int = { 
    
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